Meetings
Meeting Duration: 12:00PM - 1:30PM
Dd
Date:
June 28, 2016
Time:
12:00 pm
"Accelerating Protein-Ligand Docking Using FFTs on GPUs.”
Date:
May 31, 2016
Time:
12:00 pm
Speaker:
Xinqiang Ding
Impromptu meetings
Date:
May 17, 2016
Time:
12:00 pm
Speaker:
Various Speakers
Predicting binding affinities in a combinatorial chemical space using multi site lambda dynamics
Date:
May 10, 2016
Time:
12:00 pm
Speaker:
Kira Armacost
Integrating The Influence Of Denaturants In Native-centric Protein Folding Models
Date:
April 26, 2016
Time:
12:00 pm
Speaker:
Shuai Wei
Talk Title: PH Dependent Chemical Shifts Of Model Peptides
Date:
April 19, 2016
Time:
12:00 pm
Speaker:
Efrosini Artikis
Developing Med25-VP16 Tethered Complex Model
Date:
April 12, 2016
Time:
12:00 pm
Speaker:
Nick Foster
Folding And Transcriptional Regulation Of The PreQ1 Riboswitch
Date:
March 29, 2016
Time:
12:00 pm
Speaker:
Ryan Hayes And Julia Widom
Topological Folding Of Hairpin Ribozyme
Date:
March 22, 2016
Time:
12:00 pm
Location:
2404
Speaker:
Alex Dickson
TBD
Date:
March 8, 2016
Time:
12:00 pm
Location:
2404
Speaker:
Aaron Frank
Research Update With Kira Armacost
Date:
February 23, 2016
Time:
12:00 pm
Speaker:
Kira Armacost
Investigating The Energy Landscape Of Ribonuclease H
Date:
February 16, 2016
Time:
12:00 pm
Location:
2404
Speaker:
Liz Gichana
An Improved Search Algorithm For Protein-ligand Docking Using FFT
Date:
February 9, 2016
Time:
12:00 pm
Location:
Xinqiang Ding
TBD
Date:
February 2, 2016
Time:
12:00 pm
Location:
2404
Speaker:
Shuai Wei
Ph-dependent Random Coil NMR Chemical Shifts
Date:
January 26, 2016
Time:
12:00 pm
Location:
2404
Speaker:
Efrosini Artikis
Postdoc Interviewee Talk
Date:
January 19, 2016
Time:
12:00 pm
Location:
2404
Speaker:
Garrett Meek
Brooks Group Impromptu Talks
Date:
January 5, 2016
Time:
12:00 pm
Location:
2404
Speaker:
Various Speakers
End Of Rotation Talk
Date:
December 9, 2015
Time:
12:00 pm
Location:
Chem 2000 Conf. Room
Speaker:
Maral Budak
A Benchmark Study Of Four Molecular Docking Programs
Date:
December 1, 2015
Time:
12:00 pm
Location:
2404
Speaker:
Yanming Wang
Topological Modifications Affect Docking, Folding, And Allostery
Date:
November 24, 2015
Time:
12:00 pm
Location:
2404
Speaker:
Alex Morriss Andrews
TBD
Date:
November 17, 2015
Time:
12:00 pm
Location:
2404
Speaker:
Aaron Frank
Predicting Binding Free Energies In A Combinatorial Chemical Space Using Multisite Lambda Dynamics
Date:
November 3, 2015
Time:
12:15 pm
Location:
2404
Speaker:
Kira Armacost
Building A Predictive Coarse-Grained Force Field For Protein-Protein Interactions
Date:
October 27, 2015
Time:
12:15 pm
Location:
2404
Speaker:
Logan S. Ahlstrom
E-mail:
N/A
Building A Predictive Coarse-Grained Force Field For Protein-Protein Interactions
Date:
October 27, 2015
Time:
12:00 pm
Location:
2404
Speaker:
Logan Ahlstrom
Troy Wymore Of ORNL
Special Talk To Brooks Group On QM/MM
Date:
October 9, 2015
Time:
12:00 pm
Location:
2404
Jonah Vilseck Postdoc Interview Talk
Date:
September 29, 2015
Time:
12:00 pm
Location:
2404
Speaker:
Jonah Vilsek
Exploring The Solvent Environment Of Biomolecular Systems
Date:
September 9, 2015
Time:
12:00 pm
Location:
2404
Speaker:
Evan Arthur
Insights On How HRAS Becomes Activated And Inactivated
Date:
September 2, 2015
Time:
12:00 pm
Location:
2404
Speaker:
Xinqiang Ding
Calculation Of The Relative Free Energies Of Benzene Derivatives And HIV-RT Inhibitors Using MSλD
Date:
August 26, 2015
Time:
12:00 pm
Location:
2404
Speaker:
Tricia Charles
KB Go-like Model With Denaturants And Folding Of Beta2-microglobins.
Date:
August 19, 2015
Time:
12:00 pm
Location:
2404
Speaker:
Shuai Wei
Impromptu Research Talks
Date:
July 29, 2015
Time:
12:00 pm
Location:
2404
PH Dependence Of Folate Receptor Interactions
Date:
July 15, 2015
Time:
12:00 pm
Location:
2404
Speaker:
Elena Laricheva
Dynamics Of Protein-ligand Interactions In Enoyl Reductase (ER) Domain From Curacin And Jamaicamaide Pathways
Date:
July 1, 2015
Time:
12:00 pm
Location:
2404
Speaker:
Karunesh Arora
Flexible Receptor Docking Method Development And Molecular Dynamics Investigations Of Small Molecule-protein Interactions
Date:
June 24, 2015
Time:
12:00 pm
Location:
2404
Speaker:
Jessica Gagnon
Toward PH-dependent NMR Chemical Shifts
Date:
June 10, 2015
Time:
12:00 pm
Location:
2404
Speaker:
Efrosini Artikis
Return Of The RNA
Date:
May 20, 2015
Time:
12:00 pm
Speaker:
Garrett Goh
Impropmtu Talks
Date:
May 13, 2015
Time:
12:00 pm
Speaker:
Various Speakers
Allosteric Binding To KIX And Topological Folding Of Hairpin Ribozyme
Date:
May 6, 2015
Time:
12:00 pm
Location:
Alex Morris-Andrews
CUDA-GBSW And CUDA-CpHMD
Date:
April 29, 2015
Time:
12:00 pm
Speaker:
Evan Arthur
Chemical Shift Guided Modeling And Simulation Of Biomolecules: Still Work In Progress
Date:
April 22, 2015
Time:
12:00 pm
Location:
Chem 2404
Speaker:
Aaron T. Frank
E-mail:
N/A
Special Group Meeting - Undergrad Presentations
Date:
April 16, 2015
Time:
12:30 pm
Location:
2404
Speaker:
Fahad Sarvari, Blair Whittington, Jade Varineau, Jessica Sullivan
WEUS -ed To Be Friends: Mechanisms Of Dissociation For Long-lived Complexes With Window Exchange Umbrella Sampling
Date:
April 8, 2015
Time:
12:00 pm
Location:
2404
Speaker:
Alex Dickson
Impromptu Research Talks
Date:
April 1, 2015
Time:
12:00 pm
Location:
2404
Speaker:
Various Group Members
Postdoc Interview Talk - Title TBD
Date:
March 25, 2015
Time:
12:00 pm
Location:
2404
Speaker:
Ryan Hayes - Postdoc Applicant
Determination Of The Binding Free Energy And Specificity Of Protein-Ligand Interactions
Date:
March 18, 2015
Time:
12:00 pm
Speaker:
Kira Armacost
Using Simple Models To Help Understand Complex Chaperone Mechanisms
Date:
March 11, 2015
Time:
12:00 pm
Location:
2404
Speaker:
Logan S. Ahlstrom
Protein Folding In Osmolytes With KB Go-like Model And The Application To Biosensor Design
Date:
March 4, 2015
Time:
12:00 pm
Speaker:
Shuai Wei
E-mail:
N/A
Impromptu Research Talks
Date:
February 18, 2015
Time:
12:00 pm
Location:
2404
Speaker:
Various Speakers
Cryo-EM Density Map Guided Folding Of Proteins
Date:
February 11, 2015
Time:
12:00 pm
Location:
2404
Speaker:
Xinqiang Ding
TBD
Date:
February 4, 2015
Time:
12:00 pm
Speaker:
Karunesh
Flexible CDOCKER: Challenges Of Including Receptor Flexibility In Docking
Date:
January 26, 2015
Time:
12:00 pm
Location:
2404
Speaker:
Jessica Gagnon
Investigating The Folding Landscape Along The RNase H Ancestral Line
Date:
January 21, 2015
Time:
12:00 pm
Location:
2404
Speaker:
Liz Gichana
Current Challenges Of Modeling Ionic Surfactants In All-Atom MD Simulations
Date:
January 14, 2015
Time:
12:00 pm
Location:
2404
Speaker:
Garrett Goh
Impromptu Research Talks
Date:
January 7, 2015
Time:
12:00 pm
Location:
2404
Speaker:
Various Speakers
Ruotolo Lab Collaboration Meeting
Date:
December 17, 2014
Time:
12:00 pm
Location:
2404
Speaker:
Joe Eschweiler
PH Dependent Aggregation Propensity Of β-microglobulin Variants
Date:
December 10, 2014
Time:
12:00 pm
Location:
2404
Speaker:
Mina Jafari
Towards PH Dependent NMR Chemical Shifts
Date:
December 3, 2014
Time:
12:00 pm
Location:
Efrosini Artikis
Impromptu Research Talks
Date:
November 19, 2014
Time:
12:00 pm
Speaker:
Various Speakers
Tackling Pharmacological Problems Using Multiscale Models And Enhanced Sampling Methods For Molecular Dynamics
Date:
November 5, 2014
Time:
12:00 pm
Speaker:
Alex Dickson
Implementing CUDA-GBSW
Date:
October 29, 2014
Time:
12:00 pm
Location:
2404
Speaker:
Evan Arthur
Impromptu Research Talks
Date:
October 22, 2014
Time:
12:00 pm
Speaker:
Various Speakers
Distance-Based Approach To Predicting Chemical Shifts : Towards Chemical Shifts Guided Modeling And Simulations Of RNA
Date:
October 15, 2014
Time:
12:00 pm
Location:
Aaron Frank
Special Group Meeting With MSU Professor Kennie Merz
Date:
October 10, 2014
Time:
12:30 pm
Location:
2000 Conf. Room, 12:30 PM - 2 PM
Speaker:
Kennie Merz
Probing PH-dependent Stability Mechanism Of Acanthaporin
Date:
October 8, 2014
Time:
12:00 pm
Location:
2404
Speaker:
Huiyu Li
MMTSB Programming Meeting
Date:
October 1, 2014
Time:
12:00 pm
Location:
2000 Chem
Speaker:
David Braun
Biasing Potential Replica Exchange Multi-Site λ-Dynamics For Efficient Free Energy Calculations
Date:
September 24, 2014
Time:
12:00 pm
Speaker:
Kira Armacost
Toward Multiscale And Integrative Modeling Of Protein-Protein Interactions
Date:
September 10, 2014
Time:
12:00 pm
Speaker:
Logan S. Ahlstrom
Influenza A M2 Proton Channel, Insights From Constant PH Molecular Dynamics
Date:
September 3, 2014
Time:
12:00 pm
Location:
2404
Speaker:
Afra Panahi
Protein Based Biosensors
Date:
August 27, 2014
Time:
12:00 pm
Location:
2404
Speaker:
Shuai Wei
Impromptu Research Talks
Date:
August 20, 2014
Time:
12:00 pm
Location:
2404
Speaker:
Various Speakers
Fluorescent Proteins As PH Sensors: Insights From Constant PH Molecular Dynamics
Date:
August 6, 2014
Time:
12:00 pm
Speaker:
Elena Laricheva
Proteins As Intracellular PH Sensors
Date:
July 16, 2014
Time:
12:00 pm
Speaker:
Sean M. Law
Breaking Up Is Hard To Do: Sampling Extremely Rare Dissociation Processes With Nonequilibrium Umbrella Sampling
Date:
July 2, 2014
Time:
12:00 pm
Location:
2404
Speaker:
Alex Dickson
Identifying Potential Ras-binding Proteins Through Protein Interface Comparison.
Date:
June 25, 2014
Time:
12:00 pm
Speaker:
Xinqiang Ding
Identifying Potential Ras-binding Proteins Through Protein Interface Comparison
Date:
June 25, 2014
Time:
12:00 pm
Location:
2404
Speaker:
Xinqiang Ding
PH Dependant Alphaviral Membrane Fusion At Residual Level Resolution
Date:
June 4, 2014
Time:
12:00 pm
Speaker:
Xiancheng Zeng
Mechanistic Investigation Of Hsp70 Allostery And PH-dependent Folate Transport
Date:
May 28, 2014
Time:
12:00 pm
Location:
2404
Speaker:
Karunesh Arora
Impromptu Research Talks
Date:
May 21, 2014
Time:
12:00 pm
Location:
2404
Speaker:
Various Group Members
Towards Improving Sampling And Docking Accuracy Of CDOCKER
Date:
May 14, 2014
Time:
12:00 pm
Location:
2404
Speaker:
Jessica Gagnon
A New AMBER Hope
Date:
April 30, 2014
Time:
12:00 pm
Location:
2404
Speaker:
Garrett Goh
Investigating The Folding Landscape Along The RNase H Ancestral Line
Date:
April 23, 2014
Time:
12:00 pm
Location:
2404
Speaker:
Liz Gichana
Protein-Ligand Docking: Method Development And Applications To CBP/p300
Date:
April 16, 2014
Time:
12:00 pm
Location:
2404
Speaker:
Alaina Engdhal
Brooks Undergraduate Researcher Group Presentations
Date:
April 15, 2014
Time:
4:00 pm
Location:
1400 Chem, 4-6 PM
Comparison Of Protein-protein Interfaces Applied In Influenza Inhibitor Design
Date:
April 9, 2014
Time:
12:00 pm
Location:
2404
Speaker:
Shanshan Cheng
Understanding The Role Of Secondary Structure In RNA 3D Folding And Stability
Date:
April 2, 2014
Time:
12:00 pm
Location:
2404
Speaker:
Tony Mustoe
Resolving RNA, RNA-small Molecule And RNA-protein Structure Using NMR Chemical Shifts: Work In Progress
Date:
March 26, 2014
Time:
12:00 pm
Location:
2404
Speaker:
Aaron Frank
Generalized Born With A Simple SWitching Solvation (GBSW)
Date:
March 19, 2014
Time:
12:00 pm
Location:
2404
Speaker:
Evan Arthur
Impromptu Research Talks
Date:
March 12, 2014
Time:
12:00 pm
Speaker:
Xiancheng Zeng Et.al.
Unraveling Cellulose Microfibrils: A Twisted Tale
Date:
February 26, 2014
Time:
12:00 pm
Speaker:
Jodi Hadden
Development And Benchmarking Of The Chained-MSλD Method
Date:
February 19, 2014
Time:
12:00 pm
Location:
2404
Speaker:
Kira Armacost
Capturing The PH Response Of The Acid Stress-Sensing Chaperone HdeA With A Multiscale Model
Date:
February 12, 2014
Time:
12:00 pm
Speaker:
Logan S. Ahlstrom
TBD
Date:
February 5, 2014
Time:
12:00 pm
Location:
Alex Morriss-Andrews
PH-rex Simulation Of M2 Proton Channel Of Influenza A Virus
Date:
January 29, 2014
Time:
12:00 pm
Speaker:
Afra Panahi
Short Talks
Date:
January 15, 2014
Time:
12:00 pm
Speaker:
Various Group Members
Protein-surface Interactions With Coarse Grain Model: On SAMs And Nanoparticles
Date:
December 18, 2013
Time:
12:00 pm
Location:
2404
Speaker:
Shuai Wei
Anionic Tryptophan In Cyan Fluorescent Protein: "Unsewing" The Beta-barrel
Date:
December 11, 2013
Time:
12:00 pm
Location:
2404
Speaker:
Elena Laricheva
An Accurate Cα-based Method For Predicting Protein Secondary Structure
Date:
December 4, 2013
Time:
12:00 pm
Location:
Sean Law
Development Of Constant Humidity Molecular Dynamics (CHMD) Simulation And Its Applications
Date:
November 13, 2013
Time:
12:00 pm
Location:
Taehoon Kim
WExplore: An Order-parameter Free Enhanced Sampling Method
Date:
November 6, 2013
Time:
12:00 pm
Location:
2404
Speaker:
Alex Dickson
TBD
Date:
October 30, 2013
Time:
12:00 pm
Speaker:
Somaye Badieyan
A Peek Inside Staphylococcal Nuclease
Date:
October 23, 2013
Time:
12:00 pm
Location:
2404
Speaker:
Garrett Goh
Impromptu Short Talks
Date:
October 16, 2013
Time:
12:00 pm
Location:
2404
Speaker:
Garrett Goh
PH Dependent Activation Of Alphaviral Envelope Proteins Prior To Membrane Fusion
Date:
October 9, 2013
Time:
12:00 pm
Location:
2404
Speaker:
Xiancheng Zeng
Conformational Dynamics Regulates Catalysis In Two Related Tyrosine Phosphatases
Date:
October 2, 2013
Time:
12:00 pm
Location:
2404
Speaker:
Karunesh Arora
Development And Application Of Flexible CDOCKER, A Pseudo-explicit Structure-based Docking Method
Date:
September 25, 2013
Time:
12:00 pm
Location:
2404
Speaker:
Jessica Gagnon
PCalign: A Protein-protein Interface Comparison Method With Applications To Drug Design
Date:
September 18, 2013
Time:
12:00 pm
Location:
2404
Speaker:
Shanshan Cheng
Linking RNA Secondary Structure To Folding Free Energy Though Coarse-Grained Models
Date:
September 11, 2013
Time:
12:00 pm
Location:
2404
Speaker:
Tony Mustoe
Generalized Born With A Simple SWitching Solvation (GBSW)
Date:
September 4, 2013
Time:
12:00 pm
Location:
2404
Speaker:
Evan Arthur
Folding And Binding Of The PH-sensing Bacterial Chaperone HdeA
Date:
August 28, 2013
Time:
12:00 pm
Location:
2404
Speaker:
Logan Ahlstrom
Impromptu Short Talks - Various Speakers And Topics
Date:
August 21, 2013
Time:
12:00 pm
Location:
2404
Speaker:
Josh Buckner, David Braun, Xiancheng Zeng
Investigating RNA-Ligand Interactions With NMR And Computational Docking
Date:
August 14, 2013
Time:
12:00 pm
Location:
2404
Speaker:
Joe Yesselman
Simulating Indole Rescue In Dihydrofolate Reductase
Date:
August 7, 2013
Time:
12:00 pm
Speaker:
Alexander Jalota
Title TBD
Date:
July 31, 2013
Time:
12:00 pm
Location:
2404
Speaker:
Afra Panahi
Protein-Surface/Nano-Particle Interactions With Coarse Grain Simulation
Date:
July 17, 2013
Time:
12:00 pm
Speaker:
Shuai Wei
Rhodopsin And Cyan Fluorescent Protein: Insights From Constant PH Molecular Dynamics
Date:
July 3, 2013
Time:
12:00 pm
Speaker:
Elena N. Laricheva
Investigating Cooperativity In Transcription Factor Binding To The Coactivator CREB-binding Protein (CBP)
Date:
June 26, 2013
Time:
12:00 pm
Speaker:
Sean M. Law
Development Of Constant Humidity Molecular Dynamics
(CHMD) Simulation And Its Applications
Date:
June 12, 2013
Time:
12:00 pm
Location:
2404
Speaker:
Taehoon Kim
Quantifying Mediation In Protein Configuration Space Networks
Date:
June 5, 2013
Time:
12:00 pm
Speaker:
Alex Dickson
Advances In CPHMD Simulations Of Biomolecules
Date:
May 29, 2013
Time:
12:00 pm
Speaker:
Garrett Goh
Mechanism Of TRNA Selection On A Thermodynamic Basis And PH Dependent Structural Changes Of Alphaviral Envelope Proteins
Date:
May 22, 2013
Time:
12:00 pm
Speaker:
Xiancheng Zeng
Understanding The Affine Extension Symmetry Of Spherical Viruses
Date:
May 15, 2013
Time:
12:00 pm
Speaker:
David Wilson
Constant PH Molecular Dynamics Simulations Of Biomolecules In Implicit
Date:
May 1, 2013
Time:
12:00 pm
Speaker:
Bin Zhang
Exploring The Claisen Rearrangement And Aldol Reaction "on Water" And In Catalytic Antibodies Using QM/MM Simulations And The Examination Of Ligand Induced Conformational Changes In Alkanesulfonate Monooxygenase Using Molecular Dynamics.
Date:
April 24, 2013
Time:
12:00 pm
Speaker:
Kira Armacost
Exploring Biologically Relevant Species And Reactions-Small Molecules To Proteins
Date:
April 3, 2013
Time:
12:00 pm
Speaker:
Michael Cato
Elucidating Interactions Of Components Involved In MHC Class I Antigen Presentation Pathway
Date:
March 20, 2013
Time:
12:00 pm
Speaker:
Karunesh Arora
Molecular Dynamics Simulations Of RNA: (Mostly) Trust But Verify
Date:
March 13, 2013
Time:
12:00 pm
Speaker:
Niel Henriksen
ATP Modulates Calreticulin Function: Chaperone Or Lectin
Date:
February 27, 2013
Time:
12:00 pm
Speaker:
Jessica Gagnon
Understanding Conformational Dynamics Of Regulators Of G-protein Signaling (RGS) Proteins
Date:
February 20, 2013
Time:
12:00 pm
Speaker:
Harish Vashisth
Comparing Physicochemical Properties Of Protein-protein Interfaces
Date:
February 13, 2013
Time:
12:00 pm
Speaker:
Shanshan Cheng
Linking RNA Secondary Structure To Tertiary Structure Stability Though Coarse Grained Models
Date:
February 6, 2013
Time:
12:00 pm
Speaker:
Anthony Mustoe
RNA Docking: Scoring And Placement Algorithm Development
Date:
January 23, 2013
Time:
12:00 pm
Speaker:
Joseph Yesselman
Wrap-Up: pH-dependent Stability of the P19:siRNA Complex & Work in Progress: Investigating Cooperativity in CBP Coactivator Binding
Date:
January 16, 2013
Time:
12:00 pm
Speaker:
Sean M. Law
Deconstructing Activation Events In Rhodopsin
Date:
January 9, 2013
Time:
12:00 pm
Speaker:
Elena N. Laricheva
Optimizing Ligands For Creb Binding Protein
Date:
January 2, 2013
Time:
12:00 pm
Speaker:
Sarah Graham
How Homologous Are Homologous Proteins?
Date:
December 12, 2012
Time:
12:00 pm
Speaker:
Evan Arthur
Study Of The Partially Unfolded State Of HdeA
Date:
December 5, 2012
Time:
12:00 pm
Speaker:
Junjie Zou
Development Of Constant Humidity Molecular Dynamics (CHDM) Simulation And Its Application.
Date:
November 28, 2012
Time:
12:00 pm
Speaker:
Taehoon Kim
Advances In CPHMD^MSλD Simulations
Date:
November 14, 2012
Time:
12:00 pm
Speaker:
Garret Goh
Quantifying Hub-like Character In Protein Folding Landscapes
Date:
November 7, 2012
Time:
12:00 pm
Speaker:
Alex Dickson
Chemical Shifts And RNA Structure
Date:
October 31, 2012
Time:
12:00 pm
Speaker:
Aaron Frank
Ribosomal A-site Monitors TRNA Selection By Base Flipping
Date:
October 17, 2012
Time:
12:00 pm
Speaker:
Xiancheng Zeng
Protein Stabilities On Surfaces With Coarse Grained Simulation Methods.
Date:
October 15, 2012
Time:
12:00 pm
Speaker:
Shuai Wei
Using Point Arrays To Characterize Viral Capsid Maturation
Date:
October 10, 2012
Time:
12:00 pm
Speaker:
David Wilson
GBSW Implicit Solvent Model For RNA: A Discussion About Coulomb
Field Approximation In CHARMM
Date:
October 3, 2012
Time:
12:00 pm
Speaker:
Bin Zhang
Investigating Interactions Between Calreticulin And Nucleotides
Date:
September 26, 2012
Time:
12:00 pm
Speaker:
Karunesh Arora
Structure Based Protein-Ligand Docking And Molecular Dynamics: Lending Insight To Experimental Data
Date:
September 19, 2012
Time:
12:00 pm
Speaker:
Jessica Gagnon
Hydrogenase
Date:
September 6, 2012
Time:
12:00 pm
Speaker:
Ana P. Gamiz-Hernandez
Enhanced Sampling For Conformational Transitions And Structural Refinement
Date:
September 5, 2012
Time:
12:00 pm
Location:
Harish Vashisth
Comparing Physicochemical Propertities Of Protein-protein Interfaces
Date:
August 29, 2012
Time:
12:00 pm
Speaker:
Shanshan Cheng
Protein Crowding Affects Hydration Structure And Dynamics
Date:
August 15, 2012
Time:
12:00 pm
Speaker:
Yuji Sugita
Implicit Membrane Model, Application And Improvement
Date:
August 2, 2012
Time:
12:15 pm
Speaker:
Afra Panahi
Adding Dynamic Insight To Protein X-ray Images By Solution And Crystal Molecular Dynamics Simulation: Case Studies Of λ Cro And Cyanovirin-N
Date:
August 1, 2012
Time:
12:00 pm
Speaker:
Logan Ahlstrom
Polymer-assisted Virus-like Assembly & DNA Translocation Through MspA
Date:
July 18, 2012
Time:
12:00 pm
Speaker:
JP Mahalik
Uncovering The Relationships Between RNA Secondary Structure, 3D Structure, And Cooperativity
Date:
June 27, 2012
Time:
12:00 pm
Speaker:
Anthony Mustoe
Reinventing Computing Paradigms And Platforms To Get More Science Out Of Our Day-to-day Simulations
Date:
June 19, 2012
Time:
12:00 pm
Speaker:
Michela Taufer
Using Chemical Shifts For Prediction Of RNA Bulge Conformations
Date:
June 13, 2012
Time:
12:00 pm
Speaker:
Joseph Yesselman
Site-Specific Dynamics At The Protein-Solvent Interface
Date:
June 6, 2012
Time:
12:00 pm
Speaker:
Evan Arthur
Ab Initio Multiconfigurational Study Of Fluorescence: From Small Organic Radical Cation
To Complex Light-Sensitive Proteins
Date:
May 30, 2012
Time:
12:00 pm
Speaker:
Elena N. Laricheva
Rationalizing Structure, Stability, And Chemical Bonding Of Peculiar Clusters, Isolated And Solvated Multiply Charged Anions, And Solid State Materials
Date:
May 16, 2012
Time:
12:00 pm
Speaker:
Alina Sergeeva
Towards The Accurate First-Principles Prediction Of Ionization Equilibria In Nucleic Acids
Date:
April 18, 2012
Time:
12:00 pm
Speaker:
Garrett Goh
Investigation Of Interfacial Water Molecules Behavior: MD Simulation Of
Self Assembled Monolayer (SAM) In Various Humidity.
Date:
April 11, 2012
Time:
12:00 pm
Speaker:
Taehoon Kim
AN INVESTIGATION OF THE ROLES OF MAGNESIUM IONS IN THE CATALYTIC CYCLE OF THE PROTEIN KINASE CDK2:
Date:
April 4, 2012
Time:
12:00 pm
Speaker:
Douglas Jacobsen
Biomolecular Motors And Switches: From
Machines To Drugs
Date:
March 21, 2012
Time:
12:00 pm
Speaker:
Dr. Barry Grant
PH-Dependent Stability Of The P19-RNA Complex
Date:
March 7, 2012
Time:
12:00 pm
Speaker:
Sean M. Law
Enhanced Sampling Without Equilibrium Assumptions:
Using Nonequilibrium Umbrella Sampling With CHARMM
Date:
February 29, 2012
Time:
12:00 pm
Speaker:
Alex Dickson
Role Of A-site In Ribosomal Translation
Date:
February 15, 2012
Time:
12:00 pm
Speaker:
Xiancheng Zeng
Connecting In 6 Dimensions. Are We There Yet?
Date:
February 8, 2012
Time:
12:00 pm
Speaker:
David Wilson
Implicit Solvent Model For Molecular Dynamics Of RNA
Date:
February 1, 2012
Time:
12:00 pm
Speaker:
Bin Zhang
Two Sides Of The Same Coin: Virus Maturation From Different Perspectives
Date:
January 25, 2012
Time:
12:00 pm
Speaker:
Eric May
Characterization Of Single-stranded RNA
Date:
January 18, 2012
Time:
12:00 pm
Speaker:
Jun Feng
Understanding Interactions Between CREB Binding Protein And Artificial Transcriptional Activator Domains
Date:
January 4, 2012
Time:
12:00 pm
Speaker:
Jessica Gagnon
Energy Landscapes Of Functional Transitions In A DNA Repair Enzyme And A G Protein Coupled Receptor
Date:
December 21, 2011
Time:
12:00 pm
Speaker:
Karunesh Arora
Understanding Large-scale Conformational Changes In The β2-adrenergic Receptor-Gs Protein Complex
Date:
November 30, 2011
Time:
12:00 pm
Speaker:
Harish Vashisth